PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1MCN

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-*	-1	TGTSSDVGgYNYVS	BBBAAABEBEBBBB
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	87.5	L2	8	L2-8-1	18	YEVNKRPS	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	77.8	L3	10	L3-10-2	14	SSYEGSDNFV	BBBAELLBBB
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	23	KSGNTA	BBEABB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-*	-1	TGTSSDVGgYNYVS	BBBABEBEABBABB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	87.5	L2	8	L2-8-1	20	YEVNKRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	77.8	L3	10	L3-10-*	-1	SSYEGSDNFV	BBBBBAABBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-*	-1	KSGNTA	ABELBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024