PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1GGB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV8S9*01	93.0	Mo_IGHV8S9*01	86.7	H1	15	H1-15-1	12	SFSGFSLSTYGMgvS	BBBLBBAABBLBEBB
H	heavy	Mus.musculus	Mo_IGHV8S9*01	93.0	Mo_IGHV8S9*01	77.8	H2	9	H2-9-1	13	HIFWDGDKR	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8S9*01	93.0	Mo_IGHV8S9*01	0.0	H3	7	H3-7-*	-1	VQEGYIY	BBLLLAB
H	heavy	Mus.musculus	Mo_IGHV8S9*01	93.0	Mo_IGHV8S9*01	87.5	H4	8	H4-8-1	13	KDTSNNQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	80.0	L1	15	L1-15-*	-1	RASESVdddgNSFLH	BBABBABBLEBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	75.0	L2	8	L2-8-1	14	YRSSNLIS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	100.0	L3	9	L3-9-cis7-1	12	QQSNEDPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	97.1	Mo_IGKV3-5*01	100.0	L4	6	L4-6-1	20	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024