PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1F4W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	76.9	H1	13	H1-13-1	11	AASGYVFSTYDMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	70.0	H2	10	H2-10-4	11	FISSGGGRTS	BBBBLLABBB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	50.0	H3	10	H3-10-1	16	TRHFYAVLDY	BBBBLLBBAB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	87.5	H4	8	H4-8-1	5	RDDAKNTL	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	92.9	L1	14	L1-14-1	21	RSSTGTVTtSNYAN	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	75.0	L2	8	L2-8-1	9	GATNNRAA	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	75.0	L3	9	L3-9-1	19	ALWYSGHWV	BBBBLLBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	97.1	Mo_IGLV1*01	83.3	L4	6	L4-6-*	-1	LIGGKA	BBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024