PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1DBM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-1*03	94.3	Mo_IGHV9-1*03	84.6	H1	13	H1-13-1	20	KASGYAFTNYGVN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*03	94.3	Mo_IGHV9-1*03	90.0	H2	10	H2-10-1	22	WINIYTGEPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*03	94.3	Mo_IGHV9-1*03	0.0	H3	12	H3-12-1	17	TRGDYVNWYFDV	BBBBAAALBBAB
H	heavy	Mus.musculus	Mo_IGHV9-1*03	94.3	Mo_IGHV9-1*03	100.0	H4	8	H4-8-1	12	LETSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.2	Mo_IGKV1-110*01	93.8	L1	16	L1-16-1	15	RSSQSLihsngNTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.2	Mo_IGKV1-110*01	87.5	L2	8	L2-8-1	12	YKVSNRFY	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.2	Mo_IGKV1-110*01	85.7	L3	9	L3-9-cis7-1	14	SQSSHVPPT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.2	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024