PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1BLN

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	93.8	L1	16	L1-16-*	-1	RSSQSIvhstgNTYLE	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	8	YKISNRFS	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	71.4	L3	9	L3-9-2	18	FQASHAPRT	BBAABABBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EEEABB
B	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H1	13	H1-13-1	9	AASGFTFSSYTMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H2	10	H2-10-*	-1	TISSGGGNTY	BBBAAEEBBB
B	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H3	12	H3-12-*	-1	ARYYRYEAWFAS	BBBBBLABABAB
B	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H4	8	H4-8-1	9	RDNAKNNL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	93.8	L1	16	L1-16-*	-1	RSSQSIvhstgNTYLE	BBABBABBAAELBBBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	22	YKISNRFS	BLEABBBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	71.4	L3	9	L3-9-2	17	FQASHAPRT	BBAABABBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H1	13	H1-13-1	14	AASGFTFSSYTMS	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H2	10	H2-10-*	-1	TISSGGGNTY	BBBABEEBBB
D	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H3	12	H3-12-*	-1	ARYYRYEAWFAS	BBBBBLABABAB
D	heavy	Mus.musculus	Mo_IGHV5-9*03	98.6	Mo_IGHV5-9*03	100.0	H4	8	H4-8-1	11	RDNAKNNL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024