PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDR Structures for H2-11-*

Structures in cluster H2-11-*
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H2-11-*	5DUPH	3.052	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	CDRLenMismatch	-1.0	AISgnggsgTY		-1
H2-11-*	5GS0F	3.275	heavy	Mus.musculus	Hu_IGHV6-1*01	94.5	Hu_IGHV6-1*01	54.5	IIQKRSKwYNN	BBBBAABBBBB	-1
H2-11-*	5GS0D	3.275	heavy	Mus.musculus	Hu_IGHV6-1*01	94.5	Hu_IGHV6-1*01	54.5	IIQKRSKwYNN	BBBBAABBBBB	-1
H2-11-*	4P49A	1.4	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	CDRLenMismatch	-1.0	GISDDGdSYIS	BBBAALAABBB	-1
H2-11-*	5VK2H	3.201	heavy	Homo.sapiens	Hu_IGHV3-7*01	84.9	None	-1.0	SISSRSGsHIN	BBBBEBBABBB	-1
H2-11-*	5VK2D	3.201	heavy	Homo.sapiens	Hu_IGHV3-7*01	84.9	None	-1.0	SISSRSGsHIN	BBBBEBBABBB	-1
H2-11-*	5VK2F	3.201	heavy	Homo.sapiens	Hu_IGHV3-7*01	84.9	None	-1.0	SISSRSGsHIN	BBBBEBBABBB	-1
H2-11-*	7WPVH	2.46	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	RTYYRsKWYND	BBBBBEBBBBB	-1
H2-11-*	3ULUD	3.52	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKwYNN	BBBBAABBBBB	-1
H2-11-*	3ULVD	3.522	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKwYNN	BBBBAABBBBB	-1
H2-11-*	4J4PC	2.91	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	RTYYRsKWYND	BBBBAABBBBB	-1
H2-11-*	4J4PH	2.91	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	RTYYRsKWYND	BBBBBABBBBB	-1
H2-11-*	3ULSH	2.495	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKwYNN	BBBBBABBBBB	-1
H2-11-*	3ULSB	2.495	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKwYNN	BBBBBABBBBB	-1
H2-11-*	7SFXG	3.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	WTYYRSKwFNY	BBABAABBBBB	-1
H2-11-*	7SFXC	3.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	WTYYRSKwFNY	BBABAABBBBB	-1
H2-11-*	7SFXA	3.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	WTYYRSKwFNY	BBABAAALBBB	-1
H2-11-*	7SFXJ	3.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	WTYYRSKwFNY	BBBBAAALBBB	-1
H2-11-*	6P95H	3.5	heavy	Homo.sapiens	Hu_IGHV3-11*01	90.4	CDRLenMismatch	-1.0	SISSLSgSHIN	BBBBEBBABBB	-1
H2-11-*	6P95D	3.5	heavy	Homo.sapiens	Hu_IGHV3-11*01	90.4	CDRLenMismatch	-1.0	SISSLSgSHIN	BBBBEBBABBB	-1
H2-11-*	6P95F	3.5	heavy	Homo.sapiens	Hu_IGHV3-11*01	90.4	CDRLenMismatch	-1.0	SISSLSgSHIN	BBBBEBBABBB	-1
H2-11-*	4JO1H	2.033	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	95.7	Rb_IGHV1S40*01	54.5	CIETGSsDSAA	BBBABBLLBBB	-1
H2-11-*	4JO1I	2.033	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	95.7	Rb_IGHV1S40*01	54.5	CIETGSsDSAA	BBBABAALBBB	-1
H2-11-*	4JO2H	2.5	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	95.7	Rb_IGHV1S40*01	54.5	CIETGSsDSAA	BBBBEABABBB	-1
H2-11-*	4JO2I	2.5	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	95.7	Rb_IGHV1S40*01	54.5	CIETGSsDSAA	BBBBEABABBB	-1
H2-11-*	4JO3H	2.6	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	98.6	Rb_IGHV1S40*01	36.4	CIYGGGRDiVF	BBBABABBBBB	-1
H2-11-*	4JO4H	2.27	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	98.6	Rb_IGHV1S40*01	36.4	CIYGGGRDiVF	BBBABABBBBB	-1
H2-11-*	4JO3I	2.6	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	98.6	Rb_IGHV1S40*01	36.4	CIYGGGRDiVF	BBBABABBBBB	-1
H2-11-*	4JO4I	2.27	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	98.6	Rb_IGHV1S40*01	36.4	CIYGGGRDiVF	BBBABABBBBB	-1
H2-11-*	5M63H	2.74	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	100.0	Rb_IGHV1S40*01	36.4	CIRSSSNEiLY	BBBABEBBBBB	-1
H2-11-*	5M63M	2.74	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	100.0	Rb_IGHV1S40*01	36.4	CIRSSSNEiLY	BBBABEBBBBB	-1
H2-11-*	6P65H	EM	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	94.3	Rb_IGHV1S40*01	81.8	CIYAGsTRSTY	BBBBLBABBBB	-1
H2-11-*	6PEHA	2.296	heavy	Homo.sapiens	Rb_IGHV1S40*01	94.3	Rb_IGHV1S40*01	81.8	CIYAGsTRSTY	BBBABAALBBB	-1
H2-11-*	6P65C	EM	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	94.3	Rb_IGHV1S40*01	81.8	CIYAGsTRSTY	BBBBLBABBBB	-1
H2-11-*	6PEHH	2.296	heavy	Homo.sapiens	Rb_IGHV1S40*01	94.3	Rb_IGHV1S40*01	81.8	CIYAGstrSTY		-1
H2-11-*	6P65F	EM	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	94.3	Rb_IGHV1S40*01	81.8	CIYAGsTRSTY	BBBBLBABBBB	-1
H2-11-*	5V6LH	2.549	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	63.6	CIYGgSNDNTY	BBBABABBBBB	-1
H2-11-*	5V6LI	2.549	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	63.6	CIYGgSNDNTY	BBBBEAALBBB	-1
H2-11-*	4RZCE	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	92.8	Rb_IGHV1S40*01	54.5	SIGAGvYGSNY	BBBBEAABBBB	-1
H2-11-*	4RZCH	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	92.8	Rb_IGHV1S40*01	54.5	SIGAGvYGSNY	BBBBEAABBBB	-1
H2-11-*	4RZCA	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	92.8	Rb_IGHV1S40*01	54.5	SIGAGvYGSNY	BBBBEAABBBB	-1
H2-11-*	4RZCC	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	92.8	Rb_IGHV1S40*01	54.5	SIGAGvYGSNY	BBBBEAABBBB	-1
H2-11-*	7SWDH	EM	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	CDRLenMismatch	-1.0	VINPYGRStTL	BBBABEBBBBB	-1
H2-11-*	7SWDI	EM	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	CDRLenMismatch	-1.0	VINPYGRStTL	BBBABAALBBB	-1
H2-11-*	7SWDG	EM	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	CDRLenMismatch	-1.0	VINPYGRStTL	BBBABEALBBB	-1
H2-11-*	6OY4D	2.45	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	CDRLenMismatch	-1.0	WINPYTGeEPS	BBBAAALBBBB	-1
H2-11-*	7UL7H	EM	heavy	Homo.sapiens	Hu_IGHV3-21*01	89.0	CDRLenMismatch	-1.0	SITSRGGsKTY	BBBBLEAEBBB	-1
H2-11-*	7UL7E	EM	heavy	Homo.sapiens	Hu_IGHV3-21*01	89.0	CDRLenMismatch	-1.0	SITSRGGsKTY	BBBBLEBABBB	-1
H2-11-*	7UL7G	EM	heavy	Homo.sapiens	Hu_IGHV3-21*01	89.0	CDRLenMismatch	-1.0	SITSRGGsKTY	BBBBLALABBB	-1
H2-11-*	5UELH	1.6	heavy	Homo.sapiens	Hu_IGHV1-2*07	71.2	None	-1.0	LIKVGHgGAAI	BBBBLALLBBB	-1
H2-11-*	5UEMH	2.7	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.4	None	-1.0	LIKVGhGGGAM	BBBAABLLBBB	-1
H2-11-*	6K7OF	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*05	95.9	None	-1.0	SIFSgDSASTY	BBBABAALBBB	-1
H2-11-*	6K7OD	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*05	95.9	None	-1.0	SIFSgDSASTY	BBBABAALBBB	-1
H2-11-*	6K7OB	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*05	95.9	None	-1.0	SIFSgDSASTY	BBBABAALBBB	-1
H2-11-*	6K7OH	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*05	95.9	None	-1.0	SIFSgDSASTY	BBBABAALBBB	-1
H2-11-*	4JG0H	1.81	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	CDRLenMismatch	-1.0	SISTpRGSTTY	BBBBaALABBB	-1
H2-11-*	4JG1H	1.55	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	CDRLenMismatch	-1.0	SISTpRGSTTY	BBBBaALABBB	-1
H2-11-*	6OELH	3.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	94.5	Hu_IGHV6-1*01	100.0	RTYYRsKWYND	BBBBAAEBBBB	-1
H2-11-*	7O52H	2.41	heavy	Homo.sapiens	Hu_IGHV6-1*01	100.0	Hu_IGHV6-1*01	100.0	RTYYRsKWYND	BBBBAABBBBB	-1
H2-11-*	6NC2Q	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEALABBB	-1
H2-11-*	6NC2S	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEALABBB	-1
H2-11-*	6NCPA	2.76	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEBEBBBB	-1
H2-11-*	6NC2R	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEALABBB	-1
H2-11-*	6NCPC	2.76	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEALABBB	-1
H2-11-*	6NC2O	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEALABBB	-1
H2-11-*	6NC2P	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEALABBB	-1
H2-11-*	6NC2H	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1.0	VIGGGHGqHQS	BBBBEALABBB	-1
H2-11-*	7KC1E	EM	heavy	Homo.sapiens	Hu_IGHV6-1*01	90.4	Hu_IGHV6-1*01	72.7	RTfYRSKWYKE	BBBBBLBBBBB	-1
H2-11-*	4ZTOH	2.3	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	91.4	Rb_IGHV1S40*01	36.4	CIVTDiTGESY	BBBABAALBBB	-1
H2-11-*	4ZTOI	2.3	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	91.4	Rb_IGHV1S40*01	36.4	CIVTDiTGESY	BBBABAALBBB	-1
H2-11-*	4ZTPH	1.63	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	91.4	Rb_IGHV1S40*01	36.4	CIVTDiTGESY	BBBABAALBBB	-1
H2-11-*	7K0XA	3.1	heavy	Monodelphis.domestica	Ch_IGHV1S1*01	44.4	CDRLenMismatch	-1.0	SISSKTGsKTE	BBBBLAELBBB	-1
H2-11-*	7K0XC	3.1	heavy	Monodelphis.domestica	Ch_IGHV1S1*01	44.4	CDRLenMismatch	-1.0	SISSKTGsKTE	BBBBLLBABBB	-1
H2-11-*	7K0ZA	3.2	heavy	Monodelphis.domestica	Hu_IGHV3-30-3*02	45.2	CDRLenMismatch	-1.0	SISPKTGSkRE	BBBAAALABBB	-1
H2-11-*	7K0ZC	3.2	heavy	Monodelphis.domestica	Hu_IGHV3-30-3*02	45.2	CDRLenMismatch	-1.0	SISPKTGSkRE	BBBAABBABBB	-1
H2-11-*	5U4MB	2.5	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	95.9	CDRLenMismatch	-1.0	SISSSsDGFTS	BBBABAALBBB	-1
H2-11-*	7KGKB	2.6	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	AIESYGiKWTR	BBBABEABABB	-1
H2-11-*	7MFVB	1.9	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	AIESYGiKWTR	BBBBBEBBBBB	-1
H2-11-*	7NKSC	3.5	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	45.5	CIYVGNTyDSY	BBALBABBBBB	-1
H2-11-*	7NKSH	3.5	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	45.5	CIYVGNTyDSY	BBALBABBBBB	-1
H2-11-*	7NRHH	EM	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	45.5	CIYVGNTyDSY	BBALBABBBBB	-1
H2-11-*	2X6MA	1.62	heavy	Camelus.dromedarius	Ca_IGHV1S47*01_VHH	91.5	CDRLenMismatch	-1.0	RINGLGGvKTA	BBBBLLBABBB	-1
H2-11-*	5J56B	1.8	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	95.9	CDRLenMismatch	-1.0	SISSSsDGFTS	BBBABAALBBB	-1
H2-11-*	5U4LB	2.5	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	95.9	CDRLenMismatch	-1.0	SISSSsDGFTS	BBBABAALBBB	-1
H2-11-*	6ZTRA	2.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RIYYRSKwYND	BBBBAABBBBB	-1
H2-11-*	6ZTRH	2.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RIYYRSKwYND	BBBBAABBBBB	-1
H2-11-*	6R7TA	2.682	heavy	Lama.glama	La_IGHV1S6*01	90.4	CDRLenMismatch	-1.0	SINSSGGgIQS	BBBBLLLABBB	-1
H2-11-*	7AZBB	2.62	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	CDRLenMismatch	-1.0	AISGqdNyASY		-1
H2-11-*	7QCQAAA	1.7	heavy	Lama.glama	La_IGHV1S1*01_VHH	83.6	CDRLenMismatch	-1.0	AISYEQGsYTY	BBBABBLBBBB	-1
H2-11-*	7TE8A	1.998	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	CDRLenMismatch	-1.0	AISGLQGrDLY	BBBEAALBLBB	-1
H2-11-*	5VXLB	2.8	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	CDRLenMismatch	-1.0	SIDSYSGSiTN	BBBBEALABBB	-1
H2-11-*	7TE8C	1.998	heavy	Synthetic.construct	La_IGHV1S1*01_VHH	87.7	CDRLenMismatch	-1.0	AISSNQDQpPY	BBBABAABBBB	-1
H2-11-*	7TE8D	1.998	heavy	Synthetic.construct	La_IGHV1S1*01_VHH	87.7	CDRLenMismatch	-1.0	AISSNQDQpPY	BBBABAABBBB	-1
H2-11-*	7TE8B	1.998	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	CDRLenMismatch	-1.0	AISGLQGrDLY	BBBEAALBLBB	-1
H2-11-*	8CXQD	EM	heavy	Lama.glama	La_IGHV1S1*01_VHH	93.1	CDRLenMismatch	-1.0	WISGSPhDIIR	BBBABABBBBB	-1
H2-11-*	6SGEB	1.5	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	CDRLenMismatch	-1.0	AISRAPGpSQY	BBBABBEABBB	-1
H2-11-*	8CXQF	EM	heavy	Lama.glama	La_IGHV1S1*01_VHH	93.1	CDRLenMismatch	-1.0	WISGSPhDIIR	BBBABABBBBB	-1
H2-11-*	6SGED	1.5	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	CDRLenMismatch	-1.0	AISRAPGpSQY	BBBABBEABBB	-1
H2-11-*	8CXQE	EM	heavy	Lama.glama	La_IGHV1S1*01_VHH	93.1	CDRLenMismatch	-1.0	WISGSPhDIIR	BBBBBAABBBB	-1

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024