PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SEG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYYMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	60.0	H2	10	H2-10-1	11	AIEPMYGSTS	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	100.0	H3	13	H3-13-*	-1	ARGSAYYYDFADY	BBBBLLBAABBAB
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	6	RDTSTSTV	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	90.9	L1	11	L1-11-3	8	GGHNIGSKNVH	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	62.5	L2	8	L2-8-1	15	YQDNKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	50.0	L3	9	L3-9-1	13	QVWDNYSVL	BBBBLLBBB
B	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	100.0	L4	6	L4-6-2	19	NSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	60.0	H2	10	H2-10-1	12	AIEPMYGSTS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	100.0	H3	13	H3-13-*	-1	ARGSAYYYDFADY	BBBBLLBAABBAB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	95.9	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	8	RDTSTSTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	90.9	L1	11	L1-11-3	6	GGHNIGSKNVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	62.5	L2	8	L2-8-1	13	YQDNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	50.0	L3	9	L3-9-1	9	QVWDNYSVL	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	85.1	Hu_IGLV3-9*01	100.0	L4	6	L4-6-2	15	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024