PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7R8O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBEEBBLABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	15	GIIPIFGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H3	19	H3-19-*	-1	ARREAygprdYYYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	12	ADESTSTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	58.3	L1	12	L1-12-*	-1	TLSSGYSNYKVD	BBBAAAABBBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	CDRLenMismatch	-1.0	L2	13	L2-13-*	-1	RVGTggivgSKGD
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	L3	13	L3-13-*	-1	GADQGSGSNFvgV	BBBBBLLBAEBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	50.0	L4	6	L4-6-2	13	GSGLNR	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBEEBBLABBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	14	GIIPIFGTAN	BBBAAALBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H3	19	H3-19-*	-1	ARREAygprdYYYYYGMDV
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	12	ADESTSTA	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	58.3	L1	12	L1-12-*	-1	TLSSGYSNYKVD	BBBAAAABBBBB
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	CDRLenMismatch	-1.0	L2	13	L2-13-*	-1	RVGTggivgSKGD
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	L3	13	L3-13-*	-1	GADQGSGSNFvgV	BBBBBLLBAEBBB
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	50.0	L4	6	L4-6-2	13	GSGLNR	BBEABB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBEEBBLABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	15	GIIPIFGTAN	BBBAAALBBB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H3	19	H3-19-*	-1	ARREAygprdYYYYYGMDV
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	12	ADESTSTA	BBAAALBB
P	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	58.3	L1	12	L1-12-*	-1	TLSSGYSNYKVD	BBBAAAABBBBB
P	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	CDRLenMismatch	-1.0	L2	13	L2-13-*	-1	RVGTggivgSKGD
P	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	L3	13	L3-13-*	-1	GADQGSGSNFvgV	BBBBBLLBAEBBB
P	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	50.0	L4	6	L4-6-2	13	GSGLNR	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024