PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KEW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	RASGDSFSrKYGIS	BBBEAAAAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	40.0	H2	10	H2-10-1	15	TIMPIVGLTT	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H3	15	H3-15-*	-1	ARDEIIGaRPHWFDS
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	16	ADKSTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	RASGDSFSrKYGIS	BBBEAAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	40.0	H2	10	H2-10-1	15	TIMPIVGLTT	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H3	15	H3-15-*	-1	ARDEIIGaRPHWFDS
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	16	ADKSTSTA	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	RASGDSFSrKYGIS	BBBEAAAAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	40.0	H2	10	H2-10-1	15	TIMPIVGLTT	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H3	15	H3-15-*	-1	ARDEIIGaRPHWFDS
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	16	ADKSTSTA	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L1	11	L1-11-*	-1	RASQSVSSNLA	BBABBAAAABB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	87.5	L2	8	L2-8-4	24	YGSSTRAT	BEAABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	71.4	L3	9	L3-9-cis7-1	19	LQYYNWPRT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	23	GSGTEF	BBEABB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L1	11	L1-11-*	-1	RASQSVSSNLA	BBABBAAAABB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	87.5	L2	8	L2-8-4	24	YGSSTRAT	BEAABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	71.4	L3	9	L3-9-cis7-1	19	LQYYNWPRT	BBAABBbBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	23	GSGTEF	BBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L1	11	L1-11-*	-1	RASQSVSSNLA	BBABBAAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	87.5	L2	8	L2-8-4	24	YGSSTRAT	BEAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	71.4	L3	9	L3-9-cis7-1	19	LQYYNWPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	23	GSGTEF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024