PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CWS

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	11	SGSSSNIGNNYVS	BBBAAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	20	YDNNKRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L3	11	L3-11-1	16	GTWDSSLSAVV	BBBBAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	16	KSGTSA	BBEABB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	81.8	L1	11	L1-11-*	-1	RASQSISSNLH	BBBEBBBABBB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L2	8	L2-8-1	22	KYASQSIS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	28.6	L3	9	L3-9-*	-1	QQTNFWPYI	BBBELEBBB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L4	6	L4-6-2	13	GSGTDF	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	69.2	H1	13	H1-13-1	13	KVSGYSFSNYYIH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	40.0	H2	10	H2-10-*	-1	YIDPFNGGTS	BBBAABBBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	50.0	H3	13	H3-13-*	-1	ARSEYDPYYVMDY	BBBBABBBBBBAB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	100.0	H4	8	H4-8-1	18	ADTSTDTA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	81.8	L1	11	L1-11-*	-1	RASQSISSNLH	BBBEBBBABBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L2	8	L2-8-1	25	KYASQSIS	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	28.6	L3	9	L3-9-*	-1	QQTNFWPYI	BBBELEBBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L4	6	L4-6-2	14	GSGTDF	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	69.2	H1	13	H1-13-1	14	KVSGYSFSNYYIH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	40.0	H2	10	H2-10-*	-1	YIDPFNGGTS	BBBAABBABB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	50.0	H3	13	H3-13-*	-1	ARSEYDPYYVMDY	BBBBABABBBBAB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	100.0	H4	8	H4-8-1	14	ADTSTDTA	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	81.8	L1	11	L1-11-*	-1	RASQSISSNLH	BBBEBBBABBB
H	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L2	8	L2-8-1	22	KYASQSIS	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	28.6	L3	9	L3-9-*	-1	QQTNFWPYI	BBBLAEBBB
H	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L4	6	L4-6-2	13	GSGTDF	BBEABB
I	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	69.2	H1	13	H1-13-1	13	KVSGYSFSNYYIH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	40.0	H2	10	H2-10-*	-1	YIDPFNGGTS	BBBAABABBB
I	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	50.0	H3	13	H3-13-*	-1	ARSEYDPYYVMDY	BBBBABABBBBAB
I	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.1	Hu_IGHV1-69-2*01	100.0	H4	8	H4-8-1	18	ADTSTDTA	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	11	SGSSSNIGNNYVS	BBBAAAAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	21	YDNNKRPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L3	11	L3-11-1	16	GTWDSSLSAVV	BBBBAAALBBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	16	KSGTSA	BBEABB
L	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	76.9	H1	13	H1-13-1	26	KVSGYTLPEVAMH	BBBLBBAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	90.0	H2	10	H2-10-*	-1	GFDPEDGETM	EBBABLLBBB
L	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	100.0	H3	14	H3-14-*	-1	ATTTPFSSSYWFDP	BBBBAABALABBBA
L	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	100.0	H4	8	H4-8-1	16	EDTSTDTA	BBAAALBB
M	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	11	SGSSSNIGNNYVS	BBBAAAAAABBBB
M	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	21	YDNNKRPS	BLLABBBB
M	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L3	11	L3-11-1	16	GTWDSSLSAVV	BBBBAAALBBB
M	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	16	KSGTSA	BBEABB
N	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	76.9	H1	13	H1-13-1	26	KVSGYTLPEVAMH	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	90.0	H2	10	H2-10-*	-1	GFDPEDGETM	EBBABLLBBB
N	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	100.0	H3	14	H3-14-*	-1	ATTTPFSSSYWFDP	BBBBAABBBABAEB
N	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	100.0	H4	8	H4-8-1	16	EDTSTDTA	BBAAALBB
P	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	76.9	H1	13	H1-13-1	26	KVSGYTLPEVAMH	BBBLBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	90.0	H2	10	H2-10-*	-1	GFDPEDGETM	EBBABLLBBB
P	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	100.0	H3	14	H3-14-*	-1	ATTTPFSSSYWFDP	BBBBABEBBABAEB
P	heavy	Homo.sapiens	Hu_IGHV1-24*01	97.1	Hu_IGHV1-24*01	100.0	H4	8	H4-8-1	16	EDTSTDTA	BBAAALBB

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