PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7B27

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
CCC	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	Al_IGHV3S9*01	69.2	H1	13	H1-13-1	7	VGSGFTFSGYAMN	BBBLBBAAABBBB
CCC	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	GISNAGDLTH	BBBAABBBBB
CCC	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	Al_IGHV3S9*01	0.0	H3	15	H3-15-*	-1	HAPGvRVGTGERKDV
CCC	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	Al_IGHV3S9*01	75.0	H4	8	H4-8-1	7	RANDKNTV	BBAAALBB
DDD	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	Al_IGHV3S9*01	69.2	H1	13	H1-13-1	13	VGSGFTFSGYAMN	BBBLBBAAABBBB
DDD	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	GISNAGDLTH	BBBBLBABBB
DDD	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	Al_IGHV3S9*01	0.0	H3	15	H3-15-*	-1	HAPGvRVGTGERKDV
DDD	heavy	Vicugna.pacos	Al_IGHV3S9*01	75.3	Al_IGHV3S9*01	75.0	H4	8	H4-8-1	6	RANDKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024