PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7AKJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	90.9	L1	11	L1-11-*	-1	RASQSVSSSLA	BBABBBBLABB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	87.5	L2	8	L2-8-*	-1	YGASTRAP	ABABBBBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L3	9	L3-9-2	16	QQYNNWPLT	BBAABABBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	16	GSGTEF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	92.3	H1	13	H1-13-*	-1	SVSGGSISSHYWS	BBBLBBBAABBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H2	9	H2-9-*	-1	YIYYSGSTN	BBBBLLBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H3	15	H3-15-*	-1	ARGVLLWfGEPIFEI
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H4	8	H4-8-*	-1	VDTSKNQF	BBABLLBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	90.9	L1	11	L1-11-*	-1	RASQSVSSSLA	BBABBBBLABB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	87.5	L2	8	L2-8-*	-1	YGASTRAP	ABABBBBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L3	9	L3-9-2	16	QQYNNWPLT	BBAABABBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	16	GSGTEF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	92.3	H1	13	H1-13-*	-1	SVSGGSISSHYWS	BBBLBBBAABBBB
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H2	9	H2-9-*	-1	YIYYSGSTN	BBBBLLBBB
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H3	15	H3-15-*	-1	ARGVLLWfGEPIFEI
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H4	8	H4-8-*	-1	VDTSKNQF	BBABLLBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	92.3	H1	13	H1-13-*	-1	SVSGGSISSHYWS	BBBLBBBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H2	9	H2-9-*	-1	YIYYSGSTN	BBBBLLBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H3	15	H3-15-*	-1	ARGVLLWfGEPIFEI
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	98.6	Hu_IGHV4-59*11	100.0	H4	8	H4-8-*	-1	VDTSKNQF	BBABLLBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	90.9	L1	11	L1-11-*	-1	RASQSVSSSLA	BBABBBBLABB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	87.5	L2	8	L2-8-*	-1	YGASTRAP	ABABBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L3	9	L3-9-2	16	QQYNNWPLT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	16	GSGTEF	EBEABB

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