PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XCA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	10	AASGFTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H2	9	H2-9-1	5	VIYSGGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	12	H3-12-*	-1	ARGEGWELPYDY	BBEALAABBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	98.5	Hu_IGLV2-8*01	92.9	L1	14	L1-14-2	7	TGTSSDVGgYKYVS	BBBAAAAAABBABB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	98.5	Hu_IGLV2-8*01	100.0	L2	8	L2-8-1	9	YEVSKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	98.5	Hu_IGLV2-8*01	88.9	L3	11	L3-11-*	-1	SSYEGSNNFVV	BBBALBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	98.5	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024