PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6SVL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H1	13	H1-13-1	10	KASGFNIKDYYMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	70.0	H2	10	H2-10-1	9	RIDPENSNNI	BBBAAALBBB
A	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H3	14	H3-14-*	-1	ARGGFDTNHYAMDY	BBBBABAAAABBAB
A	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H4	8	H4-8-1	5	ADTSSNTA	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L1	11	L1-11-2	4	RASENIYSNLA	BBABBALLBBB
B	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	3	YAATNLAD	BLLABBBB
B	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L3	10	L3-10-*	-1	QHFWGTpPWT	BBABEBBbBB
B	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L4	6	L4-6-1	7	GSGTQY	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H1	13	H1-13-1	10	KASGFNIKDYYMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	70.0	H2	10	H2-10-1	9	RIDPENSNNI	BBBAAALBBB
D	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H3	14	H3-14-*	-1	ARGGFDTNHYAMDY	BBBBABAAAABBAB
D	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
E	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L1	11	L1-11-2	5	RASENIYSNLA	BBABBALLBBB
E	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	4	YAATNLAD	BLLABBBB
E	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L3	10	L3-10-*	-1	QHFWGTpPWT	BBABEBBbBB
E	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB
G	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H1	13	H1-13-1	10	KASGFNIKDYYMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	70.0	H2	10	H2-10-1	8	RIDPENSNNI	BBBAAALBBB
G	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H3	14	H3-14-*	-1	ARGGFDTNHYAMDY	BBBBABAAAABBAB
G	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
H	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H1	13	H1-13-1	12	KASGFNIKDYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	70.0	H2	10	H2-10-1	9	RIDPENSNNI	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H3	14	H3-14-*	-1	ARGGFDTNHYAMDY	BBBBABAAAABBAB
H	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
I	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L1	11	L1-11-2	4	RASENIYSNLA	BBABBALLBBB
I	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	4	YAATNLAD	BLLABBBB
I	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L3	10	L3-10-*	-1	QHFWGTpPWT	BBABEBBbBB
I	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB
K	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H1	13	H1-13-1	11	KASGFNIKDYYMH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	70.0	H2	10	H2-10-1	9	RIDPENSNNI	BBBAAALBBB
K	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H3	14	H3-14-*	-1	ARGGFDTNHYAMDY	BBBBABAAAABBAB
K	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H4	8	H4-8-1	5	ADTSSNTA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L1	11	L1-11-2	4	RASENIYSNLA	BBABBALLBBB
L	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	4	YAATNLAD	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L3	10	L3-10-*	-1	QHFWGTpPWT	BBABEBBbBB
L	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L4	6	L4-6-1	7	GSGTQY	EBEABB
M	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L1	11	L1-11-2	3	RASENIYSNLA	BBABBALLBBB
M	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	3	YAATNLAD	BLLABBBB
M	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L3	10	L3-10-*	-1	QHFWGTpPWT	BBABEBBbBB
M	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB
O	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H1	13	H1-13-1	13	KASGFNIKDYYMH	BBBLBBAAABBBB
O	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	70.0	H2	10	H2-10-1	9	RIDPENSNNI	BBBAAALBBB
O	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H3	14	H3-14-*	-1	ARGGFDTNHYAMDY	BBBBABAAAABBAB
O	heavy	Homo.sapiens	Mo_IGHV14-1*02	100.0	Mo_IGHV14-1*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
P	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L1	11	L1-11-2	4	RASENIYSNLA	BBABBALLBBB
P	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	5	YAATNLAD	BLLABBBB
P	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L3	10	L3-10-*	-1	QHFWGTpPWT	BBABEBBbBB
P	kappa	Homo.sapiens	Mo_IGKV12-46*01	98.6	Mo_IGKV12-46*01	100.0	L4	6	L4-6-1	9	GSGTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024