PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QPG

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
M	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	69.2	H1	13	H1-13-1	13	LASGFTFSNYAMT	BBBLBBAAABBBB
M	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	14	MVSNNGADTT	BBBAALABBB
M	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	50.0	H3	18	H3-18-*	-1	AKRRYggiwTGQPTDYDY
M	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	87.5	H4	8	H4-8-1	12	RDNAKNTL	BBAAALBB
N	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	69.2	H1	13	H1-13-1	13	LASGFTFSNYAMT	BBBLBBAAABBBB
N	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	14	MVSNNGADTT	BBBAALABBB
N	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	50.0	H3	18	H3-18-*	-1	AKRRYggiwTGQPTDYDY
N	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	87.5	H4	8	H4-8-1	12	RDNAKNTL	BBAAALBB
O	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	69.2	H1	13	H1-13-1	13	LASGFTFSNYAMT	BBBLBBAAABBBB
O	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	14	MVSNNGADTT	BBBAALABBB
O	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	50.0	H3	18	H3-18-*	-1	AKRRYggiwTGQPTDYDY
O	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	87.5	H4	8	H4-8-1	13	RDNAKNTL	BBAAALBB
P	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	69.2	H1	13	H1-13-1	13	LASGFTFSNYAMT	BBBLBBAAABBBB
P	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	14	MVSNNGADTT	BBBAALABBB
P	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	50.0	H3	18	H3-18-*	-1	AKRRYggiwTGQPTDYDY
P	heavy	Camelus.dromedarius	Ca_IGHV1S1*01	86.3	Ca_IGHV1S1*01	87.5	H4	8	H4-8-1	12	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024