PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P3S

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-1	19	AASGFTFSTYWMT	BBBEBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBABBABBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	16	RASQIISSSLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	29	YAASNLQS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYSTPpeLT	BBAABAAABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	26	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-*	-1	AASGFTFSTYWMT	BBBEBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBABBABBB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	15	RDNAKNSL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	13	RASQIISSSLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	25	YAASNLQS	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYstppelt
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-*	-1	AASGFTFSTYWMT	BBBEBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBABBABBB
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	16	RASQIISSSLN	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	26	YAASNLQS	BLEABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYSTPpeLT	BBAAAAAABBB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	25	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-*	-1	AASGFTFSTYWMT	BBBEBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBABBABBB
I	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
I	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	17	RASQIISSSLN	BBABBAEABBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-4	17	YAASNLQS	BEAABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYSTPpeLT	BBAABAAABBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	27	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-1	22	AASGFTFSTYWMT	BBBEBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	15	NINQDGGEKY	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	14	RASQIISSSLN	BBABBAEABBB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	21	YAASNLQS	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYSTPpeLT	BBAABAABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	20	GSGTDF	EBEABB
P	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-*	-1	AASGFTFSTYWMT	BBBEBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBABBABBB
P	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
P	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	12	RDNAKNSL	BBAAALBB
Q	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	12	RASQIISSSLN	BBABBAEABBB
Q	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-*	-1	YAASNLQS	BEBLBBBB
Q	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYStppelt
Q	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EAEABB
S	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-*	-1	AASGFTFSTYWMT	BBBEBBAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	16	NINQDGGEKY	BBBAALABBB
S	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
S	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	20	RASQIISSSLN	BBABBAEABBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-*	-1	YAASNLQS	BLEBBBBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYSTPpeLT	BBBLAEAABBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	29	GSGTDF	EBEABB
V	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	84.6	H1	13	H1-13-1	23	AASGFTFSTYWMT	BBBEBBAAABBBB
V	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBABAABBB
V	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
V	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
W	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	15	RASQIISSSLN	BBABBAEABBB
W	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	26	YAASNLQS	BLEABBBB
W	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYStppelT
W	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	29	GSGTDF	EBEABB

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