PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6FXN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	KASGGTFNNNAIN	BBBLLBAEABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	80.0	H2	10	H2-10-*	-1	GIIPMFGTAK	BBBAABEBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	100.0	H3	16	H3-16-*	-1	ARSRDLllFPHHALSP
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	13	ADESTGTA	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	16	QGDSLRSYYAS	BEAAAAABBBB
E	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
E	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-*	-1	SSRDSSGNHWV	BBBBAALBEBB
E	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	21	SSGNTA	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	KASGGTFNNNAIN	BBBLLBAEABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	80.0	H2	10	H2-10-*	-1	GIIPMFGTAK	BBBAABEBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	100.0	H3	16	H3-16-*	-1	ARSRDLllFPHHALSP
F	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	16	ADESTGTA	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	13	QGDSLRSYYAS	BEAAAAABBBB
G	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
G	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-*	-1	SSRDSSGNHWV	BBBBAALBEBB
G	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	22	SSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	KASGGTFNNNAIN	BBBLLBAEABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	80.0	H2	10	H2-10-*	-1	GIIPMFGTAK	EBBAABEBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	100.0	H3	16	H3-16-*	-1	ARSRDLllFPHHALSP
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	15	ADESTGTA	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	11	QGDSLRSYYAS	BEAAAAABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-*	-1	SSRDSSGNHWV	BBBBAALABBB
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	19	SSGNTA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	KASGGTFNNNAIN	BBBLLBAEABBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	80.0	H2	10	H2-10-*	-1	GIIPMFGTAK	BBBAABEBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	100.0	H3	16	H3-16-*	-1	ARSRDLllFPHHALSP
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	15	ADESTGTA	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	13	QGDSLRSYYAS	BEAAAAABBBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-*	-1	SSRDSSGNHWV	BBBBAALBEBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	16	SSGNTA	BBEABB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	KASGGTFNNNAIN	BBBLLBAEABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	80.0	H2	10	H2-10-*	-1	GIIPMFGTAK	BBBAABEBBB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	100.0	H3	16	H3-16-*	-1	ARSRDLllFPHHALSP
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	12	ADESTGTA	BBAAALBB
P	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	14	QGDSLRSYYAS	BEAAAAABBBB
P	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
P	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-*	-1	SSRDSSGNHWV	BBBBAALBEBB
P	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	16	SSGNTA	BBEABB
Q	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	KASGGTFNNNAIN	BBBLLBAEABBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	80.0	H2	10	H2-10-*	-1	GIIPMFGTAK	BBBAABEBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	100.0	H3	16	H3-16-*	-1	ARSRDLllFPHHALSP
Q	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	16	ADESTGTA	BBAAALBB
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	14	QGDSLRSYYAS	BEAAAAABBBB
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-*	-1	SSRDSSGNHWV	BBBBAALBEBB
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	98.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	20	SSGNTA	BBEABB

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