PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UK4

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	23	KISWRNDYTT	BBBABLLBBB
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	11	RDNASNMV	BBAAALBB
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	25	KASGRTFSNSIMG	BBBLBBAAABBBB
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	22	KISWRNDYTT	BBBABLLBBB
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	11	RDNASNMV	BBAAALBB
c	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
c	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	20	KISWRNDYTT	BBBABLLBBB
c	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
c	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	9	RDNASNMV	BBAAALBB
d	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	23	KASGRTFSNSIMG	BBBLBBAAABBBB
d	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	20	KISWRNDYTT	BBBABLLBBB
d	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
d	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	8	RDNASNMV	BBAAALBB
e	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	25	KASGRTFSNSIMG	BBBLBBAAABBBB
e	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	21	KISWRNDYTT	BBBABLLBBB
e	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
e	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	9	RDNASNMV	BBAAALBB
f	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	28	KASGRTFSNSIMG	BBBLBBAAABBBB
f	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	19	KISWRNDYTT	BBBABLLBBB
f	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
f	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	12	RDNASNMV	BBAAALBB
g	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
g	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	21	KISWRNDYTT	BBBABLLBBB
g	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
g	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	9	RDNASNMV	BBAAALBB
h	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	28	KASGRTFSNSIMG	BBBLBBAAABBBB
h	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	17	KISWRNDYTT	BBBABLLBBB
h	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
h	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	12	RDNASNMV	BBAAALBB
i	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	25	KASGRTFSNSIMG	BBBLBBAAABBBB
i	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	17	KISWRNDYTT	BBBABLLBBB
i	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
i	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	13	RDNASNMV	BBAAALBB
j	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	27	KASGRTFSNSIMG	BBBLBBAAABBBB
j	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	22	KISWRNDYTT	BBBABLLBBB
j	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
j	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	9	RDNASNMV	BBAAALBB
k	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
k	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	17	KISWRNDYTT	BBBABLLBBB
k	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
k	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	11	RDNASNMV	BBAAALBB
l	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
l	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	22	KISWRNDYTT	BBBABLLBBB
l	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
l	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	11	RDNASNMV	BBAAALBB
m	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	29	KASGRTFSNSIMG	BBBLBBAAABBBB
m	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	19	KISWRNDYTT	BBBABLLBBB
m	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
m	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	12	RDNASNMV	BBAAALBB
n	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
n	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	23	KISWRNDYTT	BBBABLLBBB
n	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
n	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	11	RDNASNMV	BBAAALBB
o	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	29	KASGRTFSNSIMG	BBBLBBAAABBBB
o	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	19	KISWRNDYTT	BBBABLLBBB
o	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
o	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	8	RDNASNMV	BBAAALBB
p	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	27	KASGRTFSNSIMG	BBBLBBAAABBBB
p	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	21	KISWRNDYTT	BBBABLLBBB
p	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
p	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	8	RDNASNMV	BBAAALBB
q	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
q	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	19	KISWRNDYTT	BBBABLLBBB
q	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
q	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	13	RDNASNMV	BBAAALBB
r	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	24	KASGRTFSNSIMG	BBBLBBAAABBBB
r	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	18	KISWRNDYTT	BBBABLLBBB
r	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
r	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	9	RDNASNMV	BBAAALBB
s	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	28	KASGRTFSNSIMG	BBBLBBAAABBBB
s	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	21	KISWRNDYTT	BBBABLLBBB
s	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
s	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	8	RDNASNMV	BBAAALBB
t	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-1	26	KASGRTFSNSIMG	BBBLBBAAABBBB
t	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-6	21	KISWRNDYTT	BBBABLLBBB
t	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AATKAYnggeTSGRGFYY
t	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	9	RDNASNMV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024