PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IJK

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	92.3	H1	13	H1-13-1	9	AASGFTFSNAWFN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	83.3	H2	12	H2-12-1	9	RIKTNtdGGTTD	BBBBAAALLBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H3	15	H3-15-*	-1	TTGEPLvNHITILDY
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H4	8	H4-8-1	6	RDDSKNTL	BBAAALBB
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	92.3	H1	13	H1-13-1	9	AASGFTFSNAWFN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	83.3	H2	12	H2-12-1	9	RIKTNtdGGTTD	BBBBAAALLBBB
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H3	15	H3-15-*	-1	TTGEPLvNHITILDY
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H4	8	H4-8-1	5	RDDSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-*	-1	KSSQSVlyssnnKNYLA	BBABBAALAABABBBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	85.7	L3	10	L3-10-*	-1	QQYYRTpPLT	BBAAAEBbBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-*	-1	KSSQSVlyssnnKNYLA	BBABBAAEAABABBBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	85.7	L3	10	L3-10-cis78-*	-1	QQYYRTpPLT	BBAABABbBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024