PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IHZ

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	92.3	H1	13	H1-13-1	8	AASGFTFSTYAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-4	13	GISGSGGSTY	BBBBLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	16	H3-16-*	-1	AKFSgkdcsgtscRDY
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSSYVIA	BBBBLABLBBBB
B	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L2	12	L2-12-*	-1	KVNsdgsHSKGD	BBBBALBBAEBB
B	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	85.7	L3	9	L3-9-1	16	QTWGAGILV	BBBBLLBBB
B	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	100.0	L4	6	L4-6-2	12	SSGAER	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	92.3	H1	13	H1-13-1	8	AASGFTFSTYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	6	GISGSGGSTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	16	H3-16-*	-1	AKFSgkdcsgtscRDY
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	14	RDNSKNTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSSYVIA	BBBBLAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L2	12	L2-12-2	12	KVNsdgsHSKGD	BBBAALBBBBBB
D	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	85.7	L3	9	L3-9-1	16	QTWGAGILV	BBBBLLBBB
D	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	100.0	L4	6	L4-6-2	12	SSGAER	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	92.3	H1	13	H1-13-1	8	AASGFTFSTYAMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	7	GISGSGGSTY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	16	H3-16-*	-1	AKFSGkdcsgtscRDY
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSSYVIA	BBBBLAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L2	12	L2-12-2	12	KVNsdgsHSKGD	BBBAALBBBBBB
F	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	85.7	L3	9	L3-9-1	17	QTWGAGILV	BBBBLLBBB
F	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	100.0	L4	6	L4-6-2	13	SSGAER	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	92.3	H1	13	H1-13-1	8	AASGFTFSTYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	5	GISGSGGSTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	16	H3-16-*	-1	AKFSGkdcsgtsCRDY
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSSYVIA	BBBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	L2	12	L2-12-2	14	KVNsdgsHSKGD	BBBAALBBBBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	85.7	L3	9	L3-9-1	15	QTWGAGILV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	100.0	L4	6	L4-6-2	12	SSGAER	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024