PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4XH2

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	9	AASGFNVSSYSIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-1	13	YISSSSGYTY	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	10	H3-10-*	-1	ARTWYYGFDY	BBBBEBEBAB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	5	ADTSKNTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RasqSVSSAVA
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	7	YSASSLYS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	11	L3-11-*	-1	QQFKrqKEPIT	BBBBBBBbABB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	12	RSGTDF	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	12	AASGFNVSSYSIH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-1	18	YISSSSGYTY	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	10	H3-10-*	-1	ARTWYYGFDY	BBBBEBEBAB
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	12	ADTSKNTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RasqSVSSAVA
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BLEABBBA
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	11	L3-11-*	-1	QQFKrqKEPIT	BBBBBBBbABB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	13	RSGTDF	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	9	AASGFNVSSYSIH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-1	10	YISSSSGYTY	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	10	H3-10-*	-1	ARTWYYGFDY	BBBBEBEBAB
E	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RasqSVSSAVA
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	7	YSASSLYS	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	11	L3-11-*	-1	QQFKrqKEPIT	BBBBBEBbABB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	11	RSGTDF	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	8	AASGFNVSSYSIH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-1	8	YISSSSGYTY	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	10	H3-10-*	-1	ARTWYYGFDY	BBBBEBEBAB
G	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	5	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	9	AASGFNVSSYSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-1	8	YISSSSGYTY	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	10	H3-10-*	-1	ARTWYYGFDY	BBBBEBEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	9	ADTSKNTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RasqsVSSAVA
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	7	YSASSLYS	BLEABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	11	L3-11-*	-1	QQFKrqKEPIT	BBBBBEBbABB
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	11	RSGTDF	BBEABB
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	9	AASGFNVSSYSIH	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-1	8	YISSSSGYTY	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	10	H3-10-*	-1	ARTWYYGFDY	BBBBEBEBAB
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	5	ADTSKNTA	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RAsqSVSSAVA
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	9	YSASSLYS	BLEABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	11	L3-11-*	-1	QQFKrqKEPIT	BBBBBBBbABB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	12	RSGTDF	BBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RasqsVSSAVA
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	6	YSASSLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	11	L3-11-*	-1	QQFKrqKEPIT	BBBBABBbABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	12	RSGTDF	BBEABB

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