PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4X7C

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSIYAMG	BBBEBBBABBBBE
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	66.7	H2	9	H2-9-1	5	SISSGGGTN	BBBAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	0.0	H3	14	H3-14-*	-1	KREDYSAYAPPSGS	BBBBBBAABBBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-*	-1	GdnaKNTV
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSIYAMG	BBBEBBBABBBBE
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	66.7	H2	9	H2-9-1	6	SISSGGGTN	BBBAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	0.0	H3	14	H3-14-*	-1	KREDYSAYAPPSGS	BBBBBBAABBBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-*	-1	GDNAKNTV	BABBBLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024