PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4NHG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	20	GVSNFRISAHTMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	12	SISTSSTYRD	BBBBLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlsdndpfDA
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	19	RDDLEDFV	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	9	RASQSIETWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	11	YKASTLKT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	21	QHYAGYSAT	BBBBAABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	12	GSGTEF	EBEABB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	10	RASQSIETWLA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	10	YKASTLKT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	21	QHYAGYSAT	BBBBAABBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	12	GSGTEF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	20	GVSNFRISAHTMN	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	13	SISTSSTYRD	BBBBLLABBB
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlsdndpfDA
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	19	RDDLEDFV	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	20	GVSNFRISAHTMN	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	13	SISTSSTYRD	BBBBLLABBB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlsdndpfDA
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	19	RDDLEDFV	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	9	RASQSIETWLA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	11	YKASTLKT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	21	QHYAGYSAT	BBBBAABBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	12	GSGTEF	EBEABB
G	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	10	RASQSIETWLA	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	10	YKASTLKT	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	20	QHYAGYSAT	BBBBAABBB
G	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	12	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	20	GVSNFRISAHTMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	13	SISTSSTYRD	BBBBLLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlsdndpfDA
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	18	RDDLEDFV	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	20	GVSNFRISAHTMN	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	13	SISTSSTYRD	BBBBLLABBB
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlsdndpfDA
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	19	RDDLEDFV	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	9	RASQSIETWLA	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	10	YKASTLKT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	21	QHYAGYSAT	BBBBAABBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	12	GSGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	9	RASQSIETWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	11	YKASTLKT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	21	QHYAGYSAT	BBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	13	GSGTEF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	20	GVSNFRISAHTMN	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	13	SISTSSTYRD	BBBBLLABBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlsdndpfDA
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	19	RDDLEDFV	BBAAALBB

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