PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4IMK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	10	KASGYTFTGYYMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	13	WINPNSGGTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	22	H3-22-*	-1	ARSPNpyyydssgYYYPGAFDI
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	8	RDTSISTA	BBAAALBB
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	6	KASGYTFTGYYMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	7	WINPNSGGTN	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	22	H3-22-*	-1	ARSPNpyyydssgYYYPGAFDI
B	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	7	RDTSISTA	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	5	GGNNIGSKSVH	BBBLAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	8	YDDSDRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	11	L3-11-1	10	QVWDSSSDHYV	BBBBAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	5	GGNNIGSKSVH	BBBLAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	10	YDDSDRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	11	L3-11-1	13	QVWDSSSDHYV	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	15	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024