PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4EVN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	14	GIIPIFGTTK	BBBBEALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	13	ADDFAGTV	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	12	YDNNKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
B	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	13	GIIPIFGTTK	BBBBEALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
C	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	12	ADDFAGTV	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	12	YDNNKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	14	GIIPIFGTTK	BBBBEALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	12	ADDFAGTV	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	12	YDNNKRPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
F	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	14	GIIPIFGTTK	BBBBEALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
G	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	13	ADDFAGTV	BBAAALBB
H	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
H	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	13	YDNNKRPS	BLEABBBB
H	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
H	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB
I	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	13	GIIPIFGTTK	BBBBEALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
I	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	12	ADDFAGTV	BBAAALBB
J	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
J	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	13	YDNNKRPS	BLEABBBB
J	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
J	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	13	GIIPIFGTTK	BBBBEALBBB
K	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
K	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	12	ADDFAGTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	13	YDNNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	13	GIIPIFGTTK	BBBBEALBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
M	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	13	ADDFAGTV	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
N	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	12	YDNNKRPS	BLEABBBB
N	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
N	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB
O	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	84.6	H1	13	H1-13-*	-1	KASGGPFRSYAIS	BBBEEaBBABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	80.0	H2	10	H2-10-3	14	GIIPIFGTTK	BBBBEALBBB
O	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	50.0	H3	14	H3-14-*	-1	AKHMGYQVRETMDV	BBBBEABAABBBAB
O	heavy	Homo.sapiens	Hu_IGHV1-69*06	87.7	Hu_IGHV1-69*06	37.5	H4	8	H4-8-1	13	ADDFAGTV	BBAAALBB
P	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	10	SGSSSNIGNNYVS	BBBAAAAAABBBB
P	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	13	YDNNKRPS	BLEABBBB
P	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	12	L3-12-*	-1	GTWDSSLSAyVV
P	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB

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