PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2RCJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
G	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
G	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
G	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
G	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
H	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
H	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
H	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
H	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
K	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
K	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
K	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
K	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
O	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
O	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
O	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
O	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
P	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
P	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
P	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
P	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
Q	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
Q	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
Q	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
Q	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
R	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	61.5	H1	13	H1-13-*	-1	SSSGFIFSSYAMY
R	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	50.0	H2	10	H2-10-*	-1	IIWDDGSDQH
R	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	11	H3-11-*	-1	ARDGGSSAPDY
R	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	75.0	H4	8	H4-8-*	-1	RNDSKNTL
S	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
S	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
S	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
S	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA
T	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	TGTSSGSITVN
T	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	50.0	L2	8	L2-8-*	-1	YRDAMRPS
T	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	44.4	L3	11	L3-11-*	-1	ASWNSSDNSYV
T	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.5	Hu_IGLV1-44*01	100.0	L4	6	L4-6-*	-1	KSGTSA

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