Column | Annotation |
---|---|
Pfam Arch | Pfam architectures having clusters with M >= cutoff, R_CF_UNPclus>=0.7. |
ClusterID | The integer number for a cluster with M >= cutoff, R_CF_UNPclus>=0.7. |
Symmetry | The symmetry of an assembly, e.g. C1 (asymmetric), Cn (cyclic symmetry, n>=2), Dn (dihedral symmetry) |
Stoichiometry | The stoichiometry of an assembly, e.g. A (monomer), A4 (homo tetramer), AB (hetero dimer), A3B3 (hetero hexamer) |
CF_clus | The number of distinct crystal forms (CFs) in a cluster |
CF_arch | The number of CFs in a Pfam architecture |
ENT_clus | The number of entries in a cluster |
UNP_clus | The number of UniProts in a cluster |
ENT_arch | The number of entries in a Pfam architecture |
UNP_arch | The number of UniProts in a Pfam architecture |
SeqID | The minimum sequence identity of a cluster. |
R_CF_UNPclus | R_CF_UNPclus = CF_UNPclus/CF_UNParch (#CFs of UniProts in a cluster divided by #CFs of these same UniProts in the Pfam architecture) |
R_PDB | R_PDB = PDBBA/ENT_clus (#Entries that have any PDB biological assemblies (BA) in a cluster divided by #Entries in the cluster) |
R_EPPIC | R_EPPIC = EPPICBA/ENT_clus (#Entries that have EPPIC "bio" assemblies in a cluster divided by #Entries in the cluster) |
R_PISA | R_PISA = PISABA/ENT_clus (#Entries that have PISA biological assemblies in a cluster divided by #Entries in the cluster) |