PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7XQ8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	None	-1.0	H1	13	H1-13-1	13	RASGYEFIDCTLN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	None	-1.0	H2	10	H2-10-6	12	WLKPRGGAVN	BBBABLLBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	Hu_IGHV1-18*01	50.0	H3	14	H3-14-*	-1	TRGKNCDYNWDFEH	BBBABAABAABBAB
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	Hu_IGHV1-18*01	37.5	H4	8	H4-8-1	9	RDVYSDTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	RTSQYGSLA
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	50.0	L2	8	L2-8-1	11	YSGSTRAA	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	7	QQYEF	BBEAB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	33.3	L4	6	L4-6-2	14	RWGPDY	BBEABB
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	RTSQYGSLA
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	50.0	L2	8	L2-8-1	11	YSGSTRAA	BLEABBBB
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	7	QQYEF	BBEAB
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	33.3	L4	6	L4-6-2	15	RWGPDY	BBEABB
v	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	None	-1.0	H1	13	H1-13-1	13	RASGYEFIDCTLN	BBBLBBAAABBBB
v	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	None	-1.0	H2	10	H2-10-6	12	WLKPRGGAVN	BBBABLLBBB
v	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	Hu_IGHV1-18*01	50.0	H3	14	H3-14-*	-1	TRGKNCDYNWDFEH	BBBABAABAABBAB
v	heavy	Homo.sapiens	Hu_IGHV1-18*01	67.1	Hu_IGHV1-18*01	37.5	H4	8	H4-8-1	10	RDVYSDTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022