PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7XIC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H1	13	H1-13-1	9	AASGFTFDDYGMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H2	10	H2-10-2	9	GINWNGGSTG	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H3	21	H3-21-*	-1	ARVGYCGGDCYSlslagfpDY
E	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H4	8	H4-8-1	3	RDNAKNSL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	6	RASQSVSYNLA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	9	YDASTRAT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L3	10	L3-10-cis78-1	13	QQYNNWpPYT	BBAABBbbBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	5	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H1	13	H1-13-1	9	AASGFTFDDYGMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H2	10	H2-10-2	9	GINWNGGSTG	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H3	21	H3-21-*	-1	ARVGYCGGDCYSlslagfpDY
H	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H4	8	H4-8-1	3	RDNAKNSL	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	6	RASQSVSYNLA	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	9	YDASTRAT	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L3	10	L3-10-cis78-1	13	QQYNNWpPYT	BBAABBbbBB
I	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	5	GSGTEF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H1	13	H1-13-1	9	AASGFTFDDYGMS	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H2	10	H2-10-2	9	GINWNGGSTG	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H3	21	H3-21-*	-1	ARVGYCGGDCYSlslagfpDY
K	heavy	Homo.sapiens	Hu_IGHV3-20*01	100.0	Hu_IGHV3-20*01	100.0	H4	8	H4-8-1	3	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	6	RASQSVSYNLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	9	YDASTRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L3	10	L3-10-cis78-1	13	QQYNNWpPYT	BBAABBbbBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	5	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022