PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7X7O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	84.6	H1	13	H1-13-1	25	KASGFTFSISAVQ	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H2	10	H2-10-1	14	WIVVGSGNTN	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H3	15	H3-15-*	-1	AAPYCGgDCSDGFDI
E	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H4	8	H4-8-1	7	RDMSTSTA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	19	RASQSVSsSYLA	BBABBBBAABBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	13	YGASSRAT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	16	QQYGNSPWT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	84.6	H1	13	H1-13-1	25	KASGFTFSISAVQ	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H2	10	H2-10-1	14	WIVVGSGNTN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H3	15	H3-15-*	-1	AAPYCGgDCSDGFDI
G	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H4	8	H4-8-1	7	RDMSTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	84.6	H1	13	H1-13-1	25	KASGFTFSISAVQ	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H2	10	H2-10-1	13	WIVVGSGNTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H3	15	H3-15-*	-1	AAPYCGgDCSDGFDI
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H4	8	H4-8-1	6	RDMSTSTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	17	RASQSVSsSYLA	BBABBBBAABBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	13	YGASSRAT	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	16	QQYGNSPWT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	84.6	H1	13	H1-13-1	25	KASGFTFSISAVQ	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H2	10	H2-10-1	14	WIVVGSGNTN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H3	15	H3-15-*	-1	AAPYCGgDCSDGFDI
J	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H4	8	H4-8-1	7	RDMSTSTA	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	19	RASQSVSsSYLA	BBABBBBAABBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	13	YGASSRAT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	16	QQYGNSPWT	BBAABBbBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	19	RASQSVSsSYLA	BBABBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	13	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	16	QQYGNSPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022