PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7X6L

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	84.6	H1	13	H1-13-1	14	AASGFTFSTYNMN	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	80.0	H2	10	H2-10-2	21	YISTSSNTIY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	100.0	H3	23	H3-23-*	-1	ARDRGCSSTncyvvgyyfYGMDV
G	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	100.0	H4	8	H4-8-1	15	RDNAKNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	84.6	H1	13	H1-13-1	14	AASGFTFSTYNMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	80.0	H2	10	H2-10-2	21	YISTSSNTIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	100.0	H3	23	H3-23-*	-1	ARDRGCSSTncyvvgyyfYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	100.0	H4	8	H4-8-1	15	RDNAKNSL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	84.6	H1	13	H1-13-1	14	AASGFTFSTYNMN	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	80.0	H2	10	H2-10-2	21	YISTSSNTIY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	100.0	H3	23	H3-23-*	-1	ARDRGCSSTncyvvgyyfYGMDV
I	heavy	Homo.sapiens	Hu_IGHV3-48*02	97.3	Hu_IGHV3-48*02	100.0	H4	8	H4-8-1	15	RDNAKNSL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	90.9	L1	11	L1-11-*	-1	RASQGISSYLA	BBABBAAAABB
J	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	23	YGATRLQS	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	85.7	L3	9	L3-9-cis7-*	-1	QQADSFPLT	BBABbBbBB
J	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEABB
K	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	90.9	L1	11	L1-11-*	-1	RASQGISSYLA	BBABBAAAABB
K	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	22	YGATRLQS	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	85.7	L3	9	L3-9-cis7-*	-1	QQADSFPLT	BBABbBbBB
K	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	90.9	L1	11	L1-11-*	-1	RASQGISSYLA	BBABBAAAABB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	22	YGATRLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	85.7	L3	9	L3-9-cis7-*	-1	QQADSFPLT	BBABbBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	94.2	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022