PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WVM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	69.2	H1	13	H1-13-1	11	AASGFTFSNFGMT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	GISGGGRDTY	BBALALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	50.0	H3	10	H3-10-*	-1	VKWGNIYFDY	BBBLBABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	63.6	L1	11	L1-11-1	24	RASLSINTFLN	BBABBALABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	11	YAASSLHG	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	8	QQSSNTpFT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	69.2	H1	13	H1-13-1	9	AASGFTFSNFGMT	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	GISGGGRDTY	BBALALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	50.0	H3	10	H3-10-*	-1	VKWGNIYFDY	BBBABABBAB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	94.5	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	63.6	L1	11	L1-11-1	23	RASLSINTFLN	BBABBALABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	11	YAASSLHG	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	8	QQSSNTpFT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022