PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WUE

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	84.6	H1	13	H1-13-1	16	KTSGYTFTEYTIY	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	70.0	H2	10	H2-10-1	14	GINPNIGDTT	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	0.0	H3	11	H3-11-*	-1	AREVYNYSFAY	BBBBAABABAB
C	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	87.5	H4	8	H4-8-1	22	VDTSSSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	100.0	L1	17	L1-17-1	16	KSSQSLlyssnqKNYLA	BBABBABBAAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	87.5	L2	8	L2-8-1	22	YWASSRES	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	13	QQYYRYPLT	BBBABBbBB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	84.6	H1	13	H1-13-1	17	KTSGYTFTEYTIY	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	70.0	H2	10	H2-10-1	15	GINPNIGDTT	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	0.0	H3	11	H3-11-*	-1	AREVYNYSFAY	BBBBAABABAB
E	heavy	Mus.musculus	Mo_IGHV1S113*01	95.1	Mo_IGHV1S113*01	87.5	H4	8	H4-8-1	13	VDTSSSTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	100.0	L1	17	L1-17-*	-1	KSSQSLlyssnqKNYLA	BBABBABBABLLBBBBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	87.5	L2	8	L2-8-1	17	YWASSRES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	10	QQYYRYPLT	BBBABBbBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	95.7	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022