PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WS5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L1	11	L1-11-2	11	RASQSISSYLN	BBABBALLBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-4	17	YGASSLQS	BEAABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	10	L3-10-*	-1	QQSYSTpPYT	BBAABABBLB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	21	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H1	13	H1-13-*	-1	AASGFTFDDYAMH	BBAABBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GISWNSDSID	BBBABBABBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDRGYEilTPASFDY
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L1	11	L1-11-2	12	RASQSISSYLN	BBABBALLBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-4	18	YGASSLQS	BEAABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	10	L3-10-*	-1	QQSYSTpPYT	BBAABABBLB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H1	13	H1-13-*	-1	AASGFTFDDYAMH	BBAABBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GISWNSDSID	BBBABBABBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDRGYEilTPASFDY
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	16	RDNAKNSL	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L1	11	L1-11-2	9	RASQSISSYLN	BBABBALLBBB
H	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-4	17	YGASSLQS	BEAABBBB
H	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L3	10	L3-10-*	-1	QQSYSTpPYT	BBAABABBLB
H	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H1	13	H1-13-*	-1	AASGFTFDDYAMH	BBAABBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GISWNSDSID	BBBABBABBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDRGYEilTPASFDY
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022