PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WOA

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	58.3	L1	12	L1-12-*	-1	RASQSINNrHLA	BBAALBAALBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	23	YGAASRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	10	QQYGSSPPT	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-3	27	GSGTDF	EAAABB
D	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	69.2	H1	13	H1-13-*	-1	KASGDTFINYAFS	BBBEBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	80.0	H2	10	H2-10-1	18	RIIPILDIAH	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	100.0	H3	13	H3-13-*	-1	ARVFRGSQYWFDP	BBBBBBABBBBAB
D	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	87.5	H4	8	H4-8-1	20	ADKSTDTA	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	69.2	H1	13	H1-13-*	-1	KASGDTFINYAFS	BBBEBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	80.0	H2	10	H2-10-1	19	RIIPILDIAH	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	100.0	H3	13	H3-13-*	-1	ARVFRGSQYWFDP	BBBBBEABBBBAB
F	heavy	Homo.sapiens	Hu_IGHV1-69*04	90.4	Hu_IGHV1-69*04	87.5	H4	8	H4-8-1	11	ADKSTDTA	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	58.3	L1	12	L1-12-*	-1	RASQSINNrHLA	BBABBBBBLBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	22	YGAASRAT	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	18	QQYGSSPPT	BBAABABBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EABABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022