PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WLY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
O	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	19	RSSQSLlhsngYNYLD	BBABBABBAALBBABB
O	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	12	YLGSNRAS	BLEABBBB
O	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L3	9	L3-9-cis7-1	19	MQALQTPFT	BBAABBbBB
O	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
P	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	21	AASGFTFDDYAMH	BBBLBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GVSWNSGTIG	BBBAALBBAE
P	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	66.7	H3	23	H3-23-*	-1	AKAVEMVRglmglgadpEYGMDV
P	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
X	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	19	RSSQSLlhsngYNYLD	BBABBABBAALBBABB
X	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	11	YLGSNRAS	BLEABBBB
X	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L3	9	L3-9-cis7-1	20	MQALQTPFT	BBAABBbBB
X	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
Y	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	23	AASGFTFDDYAMH	BBBLBBAAABBBB
Y	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GVSWNSGTIG	BBBAALBBAE
Y	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	66.7	H3	23	H3-23-*	-1	AKAVEMVRglmglgadpEYGMDV
Y	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022