PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WJZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	92.3	H1	13	H1-13-*	-1	AASGFTFDDYAIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GITWNSGTIG	BBBABBBBAE
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	66.7	H3	19	H3-19-*	-1	AKHHQiavagDAEDYYFDY
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-*	-1	GGNNIGSKSVH	BBAABAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-*	-1	YDDSDRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-*	-1	QVWDSRSDRVV	BBALAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	24	NSGNTA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	92.3	H1	13	H1-13-*	-1	AASGFTFDDYAIH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GITWNSGTIG	BBBABBBBAE
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	66.7	H3	19	H3-19-*	-1	AKHHQiavagDAEDYYFDY
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	92.3	H1	13	H1-13-*	-1	AASGFTFDDYAIH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GITWNSGTIG	BBBABBBBAE
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	66.7	H3	19	H3-19-*	-1	AKHHQiavagDAEDYYFDY
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	92.3	H1	13	H1-13-*	-1	AASGFTFDDYAIH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GITWNSGTIG	BBBABBBBAE
F	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	66.7	H3	19	H3-19-*	-1	AKHHQiavagDAEDYYFDY
F	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	92.3	H1	13	H1-13-*	-1	AASGFTFDDYAIH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GITWNSGTIG	BBBABBBBAE
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	66.7	H3	19	H3-19-*	-1	AKHHQiavagDAEDYYFDY
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	92.3	H1	13	H1-13-*	-1	AASGFTFDDYAIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GITWNSGTIG	BBBABBBBAE
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	66.7	H3	19	H3-19-*	-1	AKHHQiavagDAEDYYFDY
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-*	-1	GGNNIGSKSVH	BBAABAABBBB
N	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-*	-1	YDDSDRPS	BLLABBBB
N	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-*	-1	QVWDSRSDRVV	BBALAAALBBB
N	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	24	NSGNTA	BBEABB
O	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-*	-1	GGNNIGSKSVH	BBAABAABBBB
O	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-*	-1	YDDSDRPS	BLLABBBB
O	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-*	-1	QVWDSRSDRVV	BBALAAALBBB
O	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	24	NSGNTA	BBEABB
P	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-*	-1	GGNNIGSKSVH	BBAABAABBBB
P	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-*	-1	YDDSDRPS	BLLABBBB
P	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-*	-1	QVWDSRSDRVV	BBALAAALBBB
P	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	24	NSGNTA	BBEABB
Q	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-*	-1	GGNNIGSKSVH	BBAABAABBBB
Q	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-*	-1	YDDSDRPS	BLLABBBB
Q	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-*	-1	QVWDSRSDRVV	BBALAAALBBB
Q	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	24	NSGNTA	BBEABB
R	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-*	-1	GGNNIGSKSVH	BBAABAABBBB
R	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-*	-1	YDDSDRPS	BLLABBBB
R	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-*	-1	QVWDSRSDRVV	BBALAAALBBB
R	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	23	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022