PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WHI

#CDRs = 4; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	53.8	H1	13	H1-13-*	-1	AASDSSFYDYEMS	BBBBBBABLBBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	CDRLenMismatch	-1.0	H2	9	H2-9-*	-1	SMYPSGRTY	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	0.0	H3	12	H3-12-*	-1	VSNWASGSTGDY	BABBLABLAABB
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	75.0	H4	8	H4-8-*	-1	RDNSENML	AAALAABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	53.8	H1	13	H1-13-*	-1	AASDSSFYDYEMS	BBBBBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	CDRLenMismatch	-1.0	H2	9	H2-9-1	22	SMYPSGRTY	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	0.0	H3	12	H3-12-*	-1	VSNWASGSTGDY	BABBABBLAABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	75.0	H4	8	H4-8-*	-1	RDNSENML	ALALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	53.8	H1	13	H1-13-*	-1	AASDSSFYDYEMS	BBBBBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	CDRLenMismatch	-1.0	H2	9	H2-9-1	16	SMYPSGRTY	BBBAALBBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	0.0	H3	12	H3-12-*	-1	VSNWASGSTGDY	BABAAABLAABB
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	78.1	Hu_IGHV3-23*05	75.0	H4	8	H4-8-*	-1	RDNSENML	ALALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	97.3	Hu_IGHV3-23*04	61.5	H1	13	H1-13-*	-1	AASDFYFDYYEMS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	97.3	Hu_IGHV3-23*04	70.0	H2	10	H2-10-1	17	TISGLGGATY	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	97.3	Hu_IGHV3-23*04	50.0	H3	13	H3-13-*	-1	ATRSPFGDYAFSY	BBBBABBBABBAB
G	heavy	Homo.sapiens	Hu_IGHV3-23*04	97.3	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022