PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WEC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	None	-1.0	H1	14	H1-14-*	-1	KASGFTFTDVsSLQ	BBBLBBAEAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	80.0	H2	10	H2-10-1	12	WTVVGTGNTN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	100.0	H3	16	H3-16-*	-1	AAPfcSETSCSDGFDL
G	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	75.0	H4	8	H4-8-1	9	TDKSTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	None	-1.0	H1	14	H1-14-*	-1	KASGFTFTDVsSLQ	BBBLBBAEAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	80.0	H2	10	H2-10-1	15	WTVVGTGNTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	100.0	H3	16	H3-16-*	-1	AAPfcSETSCSDGFDL
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	75.0	H4	8	H4-8-1	13	TDKSTSTA	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	None	-1.0	H1	14	H1-14-*	-1	KASGFTFTDVsSLQ	BBAABBAEAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	80.0	H2	10	H2-10-1	15	WTVVGTGNTN	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	100.0	H3	16	H3-16-*	-1	AAPfcSETSCSDGFDL
I	heavy	Homo.sapiens	Hu_IGHV1-58*02	94.5	Hu_IGHV1-58*02	75.0	H4	8	H4-8-1	13	TDKSTSTA	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSVRiSYLA	BBABBBBAAABB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	28	SGSSSRAT	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	71.4	L3	9	L3-9-*	-1	QQYANSPWT	BBAABBBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EABABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSVRiSYLA	BBABBBBAAABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	28	SGSSSRAT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	71.4	L3	9	L3-9-*	-1	QQYANSPWT	BBAABBBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EABABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSVRiSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	27	SGSSSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	71.4	L3	9	L3-9-*	-1	QQYANSPWT	BBAABBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EABABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022