PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WDF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	84.6	H1	13	H1-13-1	11	KASGYSFTRFWMN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	100.0	H2	10	H2-10-1	11	MIHPSDSETR	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	0.0	H3	13	H3-13-*	-1	ARKDYDYDAWFAY	BBBBBBEBBBBAB
D	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	6	VDKSSTTA	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	86.7	L1	15	L1-15-1	18	RASKSVSasvySYMH	BBABBABBLLBBBBB
E	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	87.5	L2	8	L2-8-1	17	YLASSLES	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	18	HHSRELPPA	BBAABBbBB
E	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
F	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	84.6	H1	13	H1-13-1	9	KASGYSFTRFWMN	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	100.0	H2	10	H2-10-1	10	MIHPSDSETR	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	0.0	H3	13	H3-13-*	-1	ARKDYDYDAWFAY	BBBBBBEBBBBAB
F	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	7	VDKSSTTA	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	86.7	L1	15	L1-15-1	17	RASKSVSasvySYMH	BBABBABBLLBBBBB
G	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	87.5	L2	8	L2-8-1	20	YLASSLES	BLLABBBB
G	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	17	HHSRELPPA	BBAABBbBB
G	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022