PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WD8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	84.6	H1	13	H1-13-1	10	KASGYSFTRFWMN	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	100.0	H2	10	H2-10-1	14	MIHPSDSETR	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	0.0	H3	13	H3-13-*	-1	ARKDYDYDAWFAY	BBBBBBEBBBBAB
E	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	9	VDKSSTTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	86.7	L1	15	L1-15-1	17	RASKSVSasvySYMH	BBABBABBLLBBBBB
F	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	87.5	L2	8	L2-8-1	20	YLASSLES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	15	HHSRELPPA	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	21	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022