PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7W9E

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	92.3	H1	13	H1-13-1	17	KTSGYTFTEYTMY	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	80.0	H2	10	H2-10-1	16	GINPNIGDTS	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	0.0	H3	13	H3-13-*	-1	ARDGYPYYYALDH	BBBAAAALBABAL
D	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	87.5	H4	8	H4-8-1	15	VDRSSSTA	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV6-15*01	100.0	Mo_IGKV6-15*01	100.0	L1	11	L1-11-1	28	KASQNVGTNVA	BBABBAEABBB
E	kappa	Mus.musculus	Mo_IGKV6-15*01	100.0	Mo_IGKV6-15*01	87.5	L2	8	L2-8-*	-1	YSTSYRYS	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV6-15*01	100.0	Mo_IGKV6-15*01	100.0	L3	9	L3-9-cis7-1	15	QQYNSYPYT	BBAABBbBB
E	kappa	Mus.musculus	Mo_IGKV6-15*01	100.0	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	21	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022