PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7VYR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KASGGTFGNWSIS	BBAAEBABLBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	50.0	H2	10	H2-10-1	22	GIDPSRGEAT	BBBAAAEBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	100.0	H3	11	H3-11-1	19	ARETEQGGMDV	BBBBAALBBAB
A	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	100.0	H4	8	H4-8-1	10	TDESTSTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	90.9	L1	11	L1-11-3	14	GGNNIGRKSVH	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	11	YDDSDRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	55.6	L3	10	L3-10-3	10	QVYDLFSDYV	BBBBAAAEBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	10	NSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KASGGTFGNWSIS	BBAAEBAEABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	50.0	H2	10	H2-10-1	17	GIDPSRGEAT	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	100.0	H3	11	H3-11-1	21	ARETEQGGMDV	BBBBAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	98.6	Hu_IGHV1-69*16	100.0	H4	8	H4-8-1	10	TDESTSTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	90.9	L1	11	L1-11-3	10	GGNNIGRKSVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	8	YDDSDRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	55.6	L3	10	L3-10-3	12	QVYDLFSDYV	BBBBAAAEBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	12	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022