PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7VSU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	9	RASQSISSYLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-4	16	YAASSLQS	BEAABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	10	QQSYSTPLT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H1	15	H1-15-*	-1	TVSGGSVSsgSYYWS	BBBLBBABBAABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H2	9	H2-9-1	14	YIYYSGSTN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H3	11	H3-11-*	-1	AREGKNGAFDI	BBBBEBEBLAB
B	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	9	RASQSISSYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-4	16	YAASSLQS	BEAABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	10	QQSYSTPLT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H1	15	H1-15-*	-1	TVSGGSVSsgSYYWS	BBBLBBABBEBBBBB
D	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H2	9	H2-9-1	15	YIYYSGSTN	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H3	11	H3-11-*	-1	AREGKNGAFDI	BBBBEBEBLAB
D	heavy	Homo.sapiens	Hu_IGHV4-61*01	100.0	Hu_IGHV4-61*01	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB

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