PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7VPY

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-3	12	VASGRTFSSLNIV	BBBEAAAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	AINDRNTA
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	0.0	H3	11	H3-11-*	-1	HSADVNGGMDY	BBBBAALBLBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-*	-1	VASGRTFSSLNIV	BBBEBLAAABBBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	AINDRNTA
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	0.0	H3	11	H3-11-*	-1	HSADVNGGMDY	BBBBAALBLBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022