PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7VND

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	Hu_IGHV3-23*04	61.5	H1	13	H1-13-*	-1	AASDFSFYDYEMS	BBABAAAABaBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	CDRLenMismatch	-1.0	H2	9	H2-9-1	12	SMYHSGRTY	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	Hu_IGHV3-23*04	0.0	H3	12	H3-12-*	-1	VSNWASGSTGDY	BBLAAAEAAABB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	26	RDNSKNTL	BBAAALBB
V	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	Hu_IGHV3-23*04	61.5	H1	13	H1-13-*	-1	AASDFSFYDYEMS	BBABAAAABaBBB
V	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	CDRLenMismatch	-1.0	H2	9	H2-9-1	23	SMYHSGRTY	BBBAALBBB
V	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	Hu_IGHV3-23*04	0.0	H3	12	H3-12-*	-1	VSNWASGSTGDY	BBLAAAEAAABB
V	heavy	Homo.sapiens	Hu_IGHV3-23*04	84.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	24	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022