PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7VMU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	92.3	H1	13	H1-13-*	-1	AASGVTVSSNYMS	BBAABBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	77.8	H2	9	H2-9-1	14	LIYPGGSTY	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	100.0	H3	12	H3-12-*	-1	ARDLSEKGGMDV	BBBAEAAAEBAB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	11	RDNSRNTL	BBAAALBB
A	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	15	RASQGISSYLA	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	7	YAASTLQS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	100.0	L3	8	L3-8-3	21	QQLNSYPR	BBAABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022