PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7V4W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	92.9	L1	14	L1-14-1	6	RSSTGAvITSNYAN	BBAAEBBBAAALBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	62.5	L2	8	L2-8-1	8	GRTYNRVP	BLLABBBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L3	9	L3-9-4	10	ALWYSNHFV	BBBBLABBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	21	LIGDKA	BBEABB
B	heavy	Mus.musculus	Mo_IGHV4-1*01	87.7	Mo_IGHV4-1*01	84.6	H1	13	H1-13-1	11	VVSGIDFSRYWMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV4-1*01	87.7	Mo_IGHV4-1*01	80.0	H2	10	H2-10-2	11	EITPDSNTIN	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV4-1*01	87.7	Mo_IGHV4-1*01	50.0	H3	9	H3-9-*	-1	ASYYEGFAY	BBBBLBBAB
B	heavy	Mus.musculus	Mo_IGHV4-1*01	87.7	Mo_IGHV4-1*01	100.0	H4	8	H4-8-1	7	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022