PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7USL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV1S56*01	91.8	Mo_IGHV1S56*01	69.2	H1	13	H1-13-*	-1	KGSGYSFTFHNIH	BBBAAAAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV1S56*01	91.8	Mo_IGHV1S56*01	100.0	H2	10	H2-10-1	6	WIYPGDGNTK	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1S56*01	91.8	Mo_IGHV1S56*01	50.0	H3	9	H3-9-*	-1	AYGNYYFDQ	BBEAABBAB
H	heavy	Homo.sapiens	Mo_IGHV1S56*01	91.8	Mo_IGHV1S56*01	75.0	H4	8	H4-8-1	5	VDKSSNTA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV10-94*02	97.1	Mo_IGKV10-94*02	90.9	L1	11	L1-11-2	11	SASQGITNYLN	BBABBALLBBB
L	kappa	Homo.sapiens	Mo_IGKV10-94*02	97.1	Mo_IGKV10-94*02	87.5	L2	8	L2-8-*	-1	YYTSSLHS	ABAABBBA
L	kappa	Homo.sapiens	Mo_IGKV10-94*02	97.1	Mo_IGKV10-94*02	100.0	L3	9	L3-9-cis7-1	12	QQYSNLPWT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV10-94*02	97.1	Mo_IGKV10-94*02	100.0	L4	6	L4-6-1	8	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022