PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7UPL

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L1	11	L1-11-*	-1	QASQDISNYLN	BBABBBBLABB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L2	8	L2-8-*	-1	YDASNLET	ABAABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	57.1	L3	10	L3-10-*	-1	QQYKIllTWT	BBBABAAABB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	69.2	H1	13	H1-13-1	24	KASGYNFAYYWIG	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H2	10	H2-10-3	15	IIYPGDSDTR	BBBBEALBBB
E	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H3	12	H3-12-*	-1	ARGEMTAVFGDY	BBBBAAABAAAB
E	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	12	ADKSISTA	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	69.2	H1	13	H1-13-1	21	KASGYNFAYYWIG	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H2	10	H2-10-*	-1	IIYPGDSDTR	BBBAABBBBB
F	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H3	12	H3-12-*	-1	ARGEMTAVFGDY	BBBBAAABBLAB
F	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	14	ADKSISTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L1	11	L1-11-2	17	QASQDISNYLN	BBABBALLBBB
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L2	8	L2-8-*	-1	YDASNLET	ABAABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	57.1	L3	10	L3-10-*	-1	QQYKIllTWT	BBBABABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022